Files
crewAI/src/crewai/knowledge/storage/knowledge_storage.py
Brandon Hancock (bhancock_ai) 1ffa8904db apply agent ops changes and resolve merge conflicts (#1748)
* apply agent ops changes and resolve merge conflicts

* Trying to fix tests

* add back in vcr

* update tools

* remove pkg_resources which was causing issues

* Fix tests

* experimenting to see if unique content is an issue with knowledge

* experimenting to see if unique content is an issue with knowledge

* update chromadb which seems to have issues with upsert

* generate new yaml for failing test

* Investigating upsert

* Drop patch

* Update casettes

* Fix duplicate document issue

* more fixes

* add back in vcr

* new cassette for test

---------

Co-authored-by: Lorenze Jay <lorenzejaytech@gmail.com>
2024-12-12 15:04:32 -05:00

204 lines
7.1 KiB
Python

import contextlib
import hashlib
import io
import logging
import os
import shutil
from typing import Any, Dict, List, Optional, Union, cast
import chromadb
import chromadb.errors
from chromadb.api import ClientAPI
from chromadb.api.types import OneOrMany
from chromadb.config import Settings
from crewai.knowledge.storage.base_knowledge_storage import BaseKnowledgeStorage
from crewai.utilities import EmbeddingConfigurator
from crewai.utilities.constants import KNOWLEDGE_DIRECTORY
from crewai.utilities.logger import Logger
from crewai.utilities.paths import db_storage_path
@contextlib.contextmanager
def suppress_logging(
logger_name="chromadb.segment.impl.vector.local_persistent_hnsw",
level=logging.ERROR,
):
logger = logging.getLogger(logger_name)
original_level = logger.getEffectiveLevel()
logger.setLevel(level)
with (
contextlib.redirect_stdout(io.StringIO()),
contextlib.redirect_stderr(io.StringIO()),
contextlib.suppress(UserWarning),
):
yield
logger.setLevel(original_level)
class KnowledgeStorage(BaseKnowledgeStorage):
"""
Extends Storage to handle embeddings for memory entries, improving
search efficiency.
"""
collection: Optional[chromadb.Collection] = None
collection_name: Optional[str] = "knowledge"
app: Optional[ClientAPI] = None
def __init__(
self,
embedder_config: Optional[Dict[str, Any]] = None,
collection_name: Optional[str] = None,
):
self.collection_name = collection_name
self._set_embedder_config(embedder_config)
def search(
self,
query: List[str],
limit: int = 3,
filter: Optional[dict] = None,
score_threshold: float = 0.35,
) -> List[Dict[str, Any]]:
with suppress_logging():
if self.collection:
fetched = self.collection.query(
query_texts=query,
n_results=limit,
where=filter,
)
results = []
for i in range(len(fetched["ids"][0])): # type: ignore
result = {
"id": fetched["ids"][0][i], # type: ignore
"metadata": fetched["metadatas"][0][i], # type: ignore
"context": fetched["documents"][0][i], # type: ignore
"score": fetched["distances"][0][i], # type: ignore
}
if result["score"] >= score_threshold: # type: ignore
results.append(result)
return results
else:
raise Exception("Collection not initialized")
def initialize_knowledge_storage(self):
base_path = os.path.join(db_storage_path(), "knowledge")
chroma_client = chromadb.PersistentClient(
path=base_path,
settings=Settings(allow_reset=True),
)
self.app = chroma_client
try:
collection_name = (
f"knowledge_{self.collection_name}"
if self.collection_name
else "knowledge"
)
if self.app:
self.collection = self.app.get_or_create_collection(
name=collection_name, embedding_function=self.embedder_config
)
else:
raise Exception("Vector Database Client not initialized")
except Exception:
raise Exception("Failed to create or get collection")
def reset(self):
base_path = os.path.join(db_storage_path(), KNOWLEDGE_DIRECTORY)
if not self.app:
self.app = chromadb.PersistentClient(
path=base_path,
settings=Settings(allow_reset=True),
)
self.app.reset()
shutil.rmtree(base_path)
self.app = None
self.collection = None
def save(
self,
documents: List[str],
metadata: Optional[Union[Dict[str, Any], List[Dict[str, Any]]]] = None,
):
if not self.collection:
raise Exception("Collection not initialized")
try:
# Create a dictionary to store unique documents
unique_docs = {}
# Generate IDs and create a mapping of id -> (document, metadata)
for idx, doc in enumerate(documents):
doc_id = hashlib.sha256(doc.encode("utf-8")).hexdigest()
doc_metadata = None
if metadata is not None:
if isinstance(metadata, list):
doc_metadata = metadata[idx]
else:
doc_metadata = metadata
unique_docs[doc_id] = (doc, doc_metadata)
# Prepare filtered lists for ChromaDB
filtered_docs = []
filtered_metadata = []
filtered_ids = []
# Build the filtered lists
for doc_id, (doc, meta) in unique_docs.items():
filtered_docs.append(doc)
filtered_metadata.append(meta)
filtered_ids.append(doc_id)
# If we have no metadata at all, set it to None
final_metadata: Optional[OneOrMany[chromadb.Metadata]] = (
None if all(m is None for m in filtered_metadata) else filtered_metadata
)
self.collection.upsert(
documents=filtered_docs,
metadatas=final_metadata,
ids=filtered_ids,
)
except chromadb.errors.InvalidDimensionException as e:
Logger(verbose=True).log(
"error",
"Embedding dimension mismatch. This usually happens when mixing different embedding models. Try resetting the collection using `crewai reset-memories -a`",
"red",
)
raise ValueError(
"Embedding dimension mismatch. Make sure you're using the same embedding model "
"across all operations with this collection."
"Try resetting the collection using `crewai reset-memories -a`"
) from e
except Exception as e:
Logger(verbose=True).log("error", f"Failed to upsert documents: {e}", "red")
raise
def _create_default_embedding_function(self):
from chromadb.utils.embedding_functions.openai_embedding_function import (
OpenAIEmbeddingFunction,
)
return OpenAIEmbeddingFunction(
api_key=os.getenv("OPENAI_API_KEY"), model_name="text-embedding-3-small"
)
def _set_embedder_config(
self, embedder_config: Optional[Dict[str, Any]] = None
) -> None:
"""Set the embedding configuration for the knowledge storage.
Args:
embedder_config (Optional[Dict[str, Any]]): Configuration dictionary for the embedder.
If None or empty, defaults to the default embedding function.
"""
self.embedder_config = (
EmbeddingConfigurator().configure_embedder(embedder_config)
if embedder_config
else self._create_default_embedding_function()
)